Phoebe A. Rice, PhD

How do mobile genetic elements jump? We use biochemistry, structural biology, and microbiology to get mechanistic answers. Projects include the SCCmec element of MRSA and the paradigmatic Mu transposase.

NIH / NIDDK
Bethesda, MD
post-doctoral - Transposition Biochemistry
1997

Yale University
New Haven, CT
PhD - Molecular Biophysics & Biochemistry
1992

Brandeis University
Waltham, MA
BA - Biochemistry
1986

Functional Relevance of CASP16 Nucleic Acid Predictions as Evaluated by Structure Providers.
Functional Relevance of CASP16 Nucleic Acid Predictions as Evaluated by Structure Providers. Proteins. 2026 Jan; 94(1):51-78.
PMID: 40905273

Antagonism by the Type VI secretion system of Bacteroides fragilis is controlled by a TetR family regulator and released small molecule.
Antagonism by the Type VI secretion system of Bacteroides fragilis is controlled by a TetR family regulator and released small molecule. bioRxiv. 2025 Aug 20.
PMID: 40894554

Identification of cognate recombination directionality factors for large serine recombinases by virtual pulldown.
Identification of cognate recombination directionality factors for large serine recombinases by virtual pulldown. Nucleic Acids Res. 2025 Jul 19; 53(14).
PMID: 40701553

Flagellar switch inverted repeats impact heterogeneity in flagellar gene expression and thus C. difficile RT027/MLST1 virulence.
Flagellar switch inverted repeats impact heterogeneity in flagellar gene expression and thus C. difficile RT027/MLST1 virulence. Cell Rep. 2025 Jun 24; 44(6):115830.
PMID: 40504685

Functional relevance of CASP16 nucleic acid predictions as evaluated by structure providers.
Functional relevance of CASP16 nucleic acid predictions as evaluated by structure providers. bioRxiv. 2025 Apr 18.
PMID: 40568131

Large serine integrases utilise scavenged phage proteins as directionality cofactors.
Large serine integrases utilise scavenged phage proteins as directionality cofactors. Nucleic Acids Res. 2025 Jan 24; 53(3).
PMID: 39907112

Structural basis of directionality control in large serine integrases.
Structural basis of directionality control in large serine integrases. bioRxiv. 2025 Jan 13.
PMID: 39803483

Variable orthogonality of serine integrase interactions within the ?C31 family.
Variable orthogonality of serine integrase interactions within the ?C31 family. Sci Rep. 2024 11 01; 14(1):26280.
PMID: 39487291

Structure of TnsABCD transpososome reveals mechanisms of targeted DNA transposition.
Structure of TnsABCD transpososome reveals mechanisms of targeted DNA transposition. Cell. 2024 Nov 27; 187(24):6865-6881.e16.
PMID: 39383864

Flagellar switch inverted repeat impacts flagellar invertibility and varies Clostridioides difficile RT027/MLST1 virulence.
Flagellar switch inverted repeat impacts flagellar invertibility and varies Clostridioides difficile RT027/MLST1 virulence. bioRxiv. 2024 Sep 24.
PMID: 39386689

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Distinguished Educator in the Basic Sciences
University of Chicago, Biological Sciences Division
2015

NSF fellowship
1987

Gannett Newspaper Carrier Scholarship
1982 - 1986